PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS58961.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 107aa    MW: 12280.1 Da    PI: 9.911
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS58961.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.33.2e-093077455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                +h+ +Er RR++iN+++  L++l+P +     k +  a +L   ++Y++sLq
  EPS58961.1 30 SHSLAERLRREKINEKLRCLQDLVPGC----YKTMRMAGMLDVIINYVRSLQ 77
                8*************************8....355889999999999999998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000836.93E-92480No hitNo description
SuperFamilySSF474597.98E-172494IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.8E-162588IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.9262676IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.2E-73077IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.4E-73282IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:2000488Biological Processpositive regulation of brassinosteroid biosynthetic process
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    Send to blast
KKRKRTSEGG SEQQREVVHV RAKRGQATDS HSLAERLRRE KINEKLRCLQ DLVPGCYKTM  60
RMAGMLDVII NYVRSLQNQI DFLSMKLSAA SLFYDFNSSE AEAMEAL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011078318.13e-62PREDICTED: transcription factor bHLH75
SwissprotA4D9982e-48BH075_ARATH; Transcription factor bHLH75
TrEMBLS8C3L18e-75S8C3L1_9LAMI; Uncharacterized protein (Fragment)
STRINGVIT_01s0011g03720.t012e-58(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA90691724
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25330.11e-49bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]